Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015792707.1_cds_XP_016513813.1_2556
CDS Infomation

[gene=LOC107830690] [db_xref=GeneID:107830690] [protein=protein EARLY FLOWERING 3-like isoform X2] [protein_id=XP_016513813.1] [location=complement(join(70458..71354,71461..71556,71688..71739,74825..75137,75255..75633,76683..76898))] [gbkey=CDS]
Sequence

ATGAAGAGAGGGAAAGGTGAAGAGAAAGTGATGGGGCCAATGTTCCCAAGGCTTCATGTA
AATGATACAGAAAAAGGAGGTCCAAGAGCCCCTCCAAGGAACAAGATGGCTTTATATGAG
CAGCTTAGCATACCTTCTCAGAGATTCAATTCAGGGGTTTTGCCTCTTAACCCCAACAAT
AACACTGCAAAGTTGCCCCCTCCTTCCTCTAACCAGGGTAGTGGGCACGAAAGAGTTGTA
TATTTCCCTGTTCAACACCCTCCATCTGGACATCTAGCTGATAAACCACCTGGCCACAGT
TCCGATCCCAATACACTCTTGGAACAATTTGAGTTAAATAAGAGAACAGAAGAGGATGAC
TTTACAGTCCCCGTCTTTGTTAACTCCAAGCCAGGTCATGCCAATGGGAGTCATAATCTG
GATATGGAAAAGCTCTCTCCCTCTGGTCCAGTCTTCTCAGGGCATCCTAATAAAGACTTG
GAAGGACTTACGAATTTAATTCTGAGACAACAGCGCGATAGCCAGAATGAGGAGAATCCC
AAATGTATTCCAGCTAGTAGAGAGCATAGAACAACCTCGAACTCTCCATCCAAGGAATGC
AGATTTGATCGTCAGGTTGGTTGTACCATCATACCTGAACCTGTTACTGGTGTAAATGAT
GGCGATTCTTATCCCATGAAAGAATTTGCATCAGAAGAGCAGATAATTACTAATAATCTC
ATAAATGGTATGGAATCCCAGGAAGACAGGACATGTAAATCAATACAAACAGGAATTGTG
GACCAAGGTGACGACTTATCTGAGACTTCCATAGTGGAATCTATGTCTGGAACGGACATC
TCTCCTGATGATGTTGTGGGAATAATTGGCCTAAAGCGTTTCTGGAAAGCCAGAAGAGAA
ATTGTCAGCCAGCAAAGAGTGTTTGCCATTCAAGTGTTTGAGTTGCATCGACTAATAAAG
GTCCAGAAGCTCATTGCCGAGTCACCAAACAGTATGCTTGAAGATGCTGCTTATTTAGGC
AAACCATTAAAGAGTTCGTCTGGTAAAAGACTGCCATTGGAGTGTATTATTAGAGAATCT
CAAAGTGTTCCGAAGCGCAAGAATGATTCTGAGAAGCCTAACTTCAGGATGGAATGCTCT
GCTGAAAACACTGTGGGGAAGGCATCTCTTTCTTCTGTGCAAAACAGTAGCCAGCTCTCT
AGCCACAGACCATTTTCAGGAAATCCCCCACCAACGCCTGTGACAAACGATGCTAACACG
AGTCCCTGGTGCTTTCAACAACCTCCGGGGCACCAATGGTTGATCCCAGTGATGTCTCCT
TCTGAAGGACTTGTATACAAGCCATTTCCTGGACCTGGATTTACGAGTCCTATTAATGGA
GGTTGTGGACCTCCAGGGTCGATGGGGAACTTTTTTCCTCCAGCTATTGGAGTTCCTGGT
CCTCATCCTCGCTATCAAGGAATGGGAGTTCCTTTCGCGCCTCCAACTGGTCACGGCTAT
TTTCCTCATTATAGCATGCCAGTTATGAATCCACCAATCTCATCATCTACTGTTGAAGAA
TCAAACCAATTTACTTCGCCAGGTTTTCAACGCCAGTTATCTGGAGGGGTTGATAACTTT
AACATTCAACATCAGGACTCAAGTAATGGTCCGAGTGAGAAGAATGGAAATGTTCCAGAT
GTTTTAAGGTTTCAGGCCACCAGAGATAATGAGCTACAAGCCAGCACTGCAAGCAGTCCA
AGTGAGAGAGCGGCAGTGAGTAACGCCACACAAGGAAGAAACATGCTTTCTCTTTTCCCC
ACATCTCCAGCTACGGACAACCCTGATCATTCAGCAAGAGTTATCAAAGTTGTACCTCAC
AATCCAAGGTCTGCCACAGAATCTGCCGCTCGGATATTTCAGTCTATACAAGAAGAGAGA
AAACAACATGACACAGCTTTCACTCGTCTGTAG

Peptide Sequence

PEP ID

XP_016513813.1
PEP Infomation

PREDICTED: protein EARLY FLOWERING 3-like isoform X2 [Nicotiana tabacum]
Sequence

MKRGKGEEKVMGPMFPRLHVNDTEKGGPRAPPRNKMALYEQLSIPSQRFNSGVLPLNPNN
NTAKLPPPSSNQGSGHERVVYFPVQHPPSGHLADKPPGHSSDPNTLLEQFELNKRTEEDD
FTVPVFVNSKPGHANGSHNLDMEKLSPSGPVFSGHPNKDLEGLTNLILRQQRDSQNEENP
KCIPASREHRTTSNSPSKECRFDRQVGCTIIPEPVTGVNDGDSYPMKEFASEEQIITNNL
INGMESQEDRTCKSIQTGIVDQGDDLSETSIVESMSGTDISPDDVVGIIGLKRFWKARRE
IVSQQRVFAIQVFELHRLIKVQKLIAESPNSMLEDAAYLGKPLKSSSGKRLPLECIIRES
QSVPKRKNDSEKPNFRMECSAENTVGKASLSSVQNSSQLSSHRPFSGNPPPTPVTNDANT
SPWCFQQPPGHQWLIPVMSPSEGLVYKPFPGPGFTSPINGGCGPPGSMGNFFPPAIGVPG
PHPRYQGMGVPFAPPTGHGYFPHYSMPVMNPPISSSTVEESNQFTSPGFQRQLSGGVDNF
NIQHQDSSNGPSEKNGNVPDVLRFQATRDNELQASTASSPSERAAVSNATQGRNMLSLFP
TSPATDNPDHSARVIKVVPHNPRSATESAARIFQSIQEERKQHDTAFTRL

Transcript Sequence

Gene sequence data has not been registered.